scanpy_plus.pl.ridgeplot module

scanpy_plus.pl.ridgeplot.ridgeplot(adata, keys='log1p_total_counts', split_by='pool', title=None, alpha=1, height=1.2, aspect=9, overlap=0.3)

Generates ridgeplot akin to Seurat. adata: anndata obj x: Which obs column with continuous variable to plot split_by: Which obs column to split by. For eg. Leiden clusters title: str alpha: transparency of the kdeplot height: height of the plot aspect: aspect overlap: overlap between two kdeplots. returns: None